maxdip – Estimating Cross-over and Gene Conversion Rates from Diploid unphased Polymorphism data

maxdip

:: DESCRIPTION

maxdip is a software to estimate rho (4Nr) and gene conversion rates  using random samples with two-site  unphased diploid information. The estimate is obtained by a maximum composite likelihood method based on pairs of sites,

::DEVELOPER

Richard R. Hudson

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux
  • C++ Compiler

:: DOWNLOAD

 maxdip

:: MORE INFORMATION

Citation:

Hudson, R. R. (2001)
Two-locus sampling distributions and their application.
Genetics 159: 1805-1817