Tag: Matcher

MODMatcher 0.1.0 – Mult-Omics Data Matcher

MODMatcher 0.1.0

:: DESCRIPTION

MODMatcher is a multi-omics data matcher for integrative genomic analysis.

::DEVELOPER

Zhu lab

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux
  • Perl
  • R

:: DOWNLOAD

 MODMatcher

:: MORE INFORMATION

Citation:

PLoS Comput Biol. 2014 Aug 14;10(8):e1003790. doi: 10.1371/journal.pcbi.1003790. eCollection 2014.
MODMatcher: multi-omics data matcher for integrative genomic analysis.
Yoo S, Huang T, Campbell JD, Lee E1, Tu Z, Geraci MW, Powell CA, Schadt EE, Spira A, Zhu J.

PatMaN 1.2.2 – DNA Pattern Matcher for Short Sequences

PatMaN 1.2.2

:: DESCRIPTION

Patman searches for short patterns in large DNA databases, allowing for approximate matches. It is optimized for searching for many small pattern at the same time, for example microarray probes.

::DEVELOPER

Department of Genetics/Bioinformatics – Max Planck Institut

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux

:: DOWNLOAD

 Patman

:: MORE INFORMATION

Citation

Kay Prüfer et al.
PatMaN: rapid alignment of short sequences to large databases.
Bioinformatics. 2008 Jul 1;24(13):1530-1