Tag: MANGO

Mango 1.0.3 – ChIA-PET Analysis Software

Mango 1.0.3

:: DESCRIPTION

Mango is a complete ChIA-PET (Chromatin Interaction Analysis by Paired-End Tag sequencing) data analysis pipeline that provides statistical confidence estimates for interactions and corrects for major sources of bias including differential peak enrichment and genomic proximity.

::DEVELOPER

Mango team

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux
  • R
  • Bowtie
  • Bedtools
  • MACS2

:: DOWNLOAD

 Mango

:: MORE INFORMATION

Citation

Mango: A bias correcting ChIA-PET analysis pipeline.
Phanstiel DH, Boyle AP, Heidari N, Snyder MP.
Bioinformatics. 2015 Jun 1. pii: btv336.

MANGO – Prediction of Protein Function from Manually Annotated proteins based on GO (Gene Ontology)

MANGO

:: DESCRIPTION

MANGO is a server for predicting functional class of a protein. It predict function according to GO categories. The method is developed on protein in UNIPROT database whoes function have been assigned manually according to GO criteria.

::DEVELOPER

Dr. G P S Raghava,

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Web Browser

:: DOWNLOAD

  NO

:: MORE INFORMATION

Citation

Raghava, G. P. S. (2006)
MANGO: prediction of Genome Ontology (GO) class of a protein from its amino acid and dipeptide composition using nearest neighbor approach.
CASP7: 93