MaGnET 2.0 – Malaria Genome Exploration Tool

MaGnET 2.0

:: DESCRIPTION

MaGnET is a software tool enabling intuitive ‘exploration-style’ visualization of functional genomics data relating to the malaria parasite, Plasmodium falciparum.

::DEVELOPER

MaGnET team

:: SCREENSHOTS

MaGnET

:: REQUIREMENTS

  • Windows/Linux/MacOsX
  • Java

:: DOWNLOAD

 MaGnET

:: MORE INFORMATION

Citation:

Bioinformatics. 2013 Sep 15;29(18):2350-2. doi: 10.1093/bioinformatics/btt384. Epub 2013 Jul 27.
MaGnET: Malaria Genome Exploration Tool.
Sharman JL1, Gerloff DL.

iSMP-Grey – Predicting Secretory Proteins of Malaria Parasite Using grey- PsePSSM and SVM

iSMP-Grey

:: DESCRIPTION

The web-server iSMP-Grey was establish for identifying uncharacterized proteins as secretory proteins of malaria parasite or not according to their evolutionary information in form of position specific scoring matrix (PSSM).

::DEVELOPER

Xiao Lab

:: SCREENSHOTS

n/a

:: REQUIREMENTS

  • Web browser

:: DOWNLOAD

 NO

:: MORE INFORMATION

Citation

PLoS One. 2012;7(11):e49040. doi: 10.1371/journal.pone.0049040. Epub 2012 Nov 26.
Predicting secretory proteins of malaria parasite by incorporating sequence evolution information into pseudo amino acid composition via grey system model.
Lin WZ1, Fang JA, Xiao X, Chou KC.