MAIA 2.75 – Microarray Image Analysis

MAIA 2.75

:: DESCRIPTION

MAIA is a software package for automatic processing of the one- and two- (typically, Cy3-green/Cy5-red) color images produced in cDNA, CGH (comparative genome hybridization) or protein microarray technologies. It incorporates the following modules:

  • The spot localization module
  • The spot quantification module
  • The quality control module
  • The image simulator

::DEVELOPER

Institut Curie

:: SCREENSHOTS

:: REQUIREMENTS

:: DOWNLOAD

MAIA

:: MORE INFORMATION

MAIA 0.5 – Integrating Genome Assemblies

MAIA 0.5

:: DESCRIPTION

MAIA (Multiple Assembly IntegrAtion) is an algorithm to integrate multiple genome assemblies. For example, assemblies originating from:
– Different runs of a de novo assembler
– Assemblies of different data types
– Comparative assemblies

::DEVELOPER

The Delft Bioinformatics Lab

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Windows / Linux / Mac OsX
  • Matlab
  • MUMmer package
  • GAIMC toolbox

:: DOWNLOAD

  MAIA

:: MORE INFORMATION

Citation

Bioinformatics. 2010 Sep 15;26(18):i433-9.
Integrating genome assemblies with MAIA.
Nijkamp J, Winterbach W, van den Broek M, Daran JM, Reinders M, de Ridder D.

MAIA 1.0 – Complex Segregaton Analysis in Animal Pedigrees

MAIA 1.0

:: DESCRIPTION

MAIA is a program for complex segregation analysis in animals. Allow analysis of pedigrees where founders come from two different populations (breeds)

::DEVELOPER

Yurii Aulchenko ( yurii@bionet.nsc.ru) @ Laboratory of the Methods of Genetic Analysis , Institute of Cytology and Genetics, Novosibirsk, Russia.

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Window

:: DOWNLOAD

 MAIA

:: MORE INFORMATION

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