Magnolia – Classification of Coding and Noncoding RNAs

Magnolia

:: DESCRIPTION

Magnolia is a program suite to classify RNA sequences as protein-coding or noncoding genes by comparative analysis. It also produces advanced multiple sequence alignment for the data.

::DEVELOPER

Bonsai Bioinformatics

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Web Browser

:: DOWNLOAD

 NO

:: MORE INFORMATION

Citation

MAGNOLIA: multiple alignment of protein-coding and structural RNA sequences
Arnaud Fontaine, Antoine de Monte, Helene Touzet
Nucleic Acids Research 36(Web-Server-Issue): 14-18 (2008)

MAGNOLIA 1.2 – Microarray Data Management & Export System for PFGRC Microarrays

MAGNOLIA 1.2

:: DESCRIPTION

Magnolia is a microarray data management and export system for researchers who use PFGRC microarrays. Since it has been an obligation to submit microarray experiment data to public repositories for publishing the experimental results, collecting and storing the data is an essential step in microarray study. Implemented with H2 DBMS as the backend storage, Magnolia provides PFGRC array users with a series of intelligent entry form to collect the information or parameters of experiment, bio-source, sample, probe, slide, scan, expression, and normalization, which is MIAME compliant.

::DEVELOPER

J. Craig Venter Institute

:: SCREENSHOTS

:: REQUIREMENTS

  • Linux / Windows / Mac OsX
  • JAVA

:: DOWNLOAD

MAGNOLIA

:: MORE INFORMATION

This application is released under the GPL v3 License: View License

Contact the PFGRC’s Magnolia Development Team by email: magnolia@jcvi.org