MAGIC V1.0.2 / MAGIC-web – Mass Spectrometry-based Automated Glycopeptide IdentifiCation platform

MAGIC V1.0.2 / MAGIC-web

:: DESCRIPTION

MAGIC is an automated tool for glycopeptide identification and glycan composition determination.

MAGIC-web is a web server aiming to provide mass spectrometry-based automated glycoprotein identification service.

::DEVELOPER

Computational Omic Labortary

:: SCREENSHOTS

N/A

:: REQUIREMENTS

Windows

:: DOWNLOAD

MAGIC

:: MORE INFORMATION

Citation

MAGIC-web: a platform for untargeted and targeted N-linked glycoprotein identification.
Lih TM, Choong WK, Chen CC, Cheng CW, Lin HN, Chen CT, Chang HY, Hsu WL, Sung TY.
Nucleic Acids Res. 2016 Apr 15. pii: gkw254

Anal Chem. 2015 Feb 17;87(4):2466-73. doi: 10.1021/ac5044829. Epub 2015 Jan 28.
MAGIC: an automated N-linked glycoprotein identification tool using a Y1-ion pattern matching algorithm and in silico MS2 approach.
Lynn KS1, Chen CC, Lih TM, Cheng CW, Su WC, Chang CH, Cheng CY, Hsu WL, Chen YJ, Sung TY.

MAGIC 0.6.0 – Integrative and Accurate Comparative Genome Mapping

MAGIC 0.6.0

:: DESCRIPTION

MAGIC is an integrative and accurate method for comparative genome mapping.The method consists of two phases: preprocessing for identifying “maximal similar segments,” and mapping for clustering and classifying these segments. MAGIC’s main novelty lies in its biologically intuitive clustering approach, which aims towards both calculating reorder-free segments and identifying orthologous segments. MAGIC can be used for identifying orthologous segments, analyzing duplications events, studying rearrangements, locating potential horizontal transfer events, etc.

::DEVELOPER

MAGIC Team

:: SCREENSHOTS

:: REQUIREMENTS

Linux/windows/MacOsX
Java

:: DOWNLOAD

MAGIC

:: MORE INFORMATION

Citation

Swidan, F., Rocha, E. P. C., Shmoish, M., Pinter, R. Y.
An Integrative Method for Accurate Comparative Genome Mapping.
Comparative Genome Mapping. PLoS Comput Biol 2(8): e75.