iBRET – High Confidence Detection of Protein-protein Interactions in Living Cells

iBRET

:: DESCRIPTION

iBRET is an automated informatics-aided and bioluminescence resonance energy transfer based method enabling high-throughput detection of interactions in living cells.

::DEVELOPER

Institute for Bioinformatics, Ludwig-Maximilians-Universität München

:: SCREENSHOTS

iBRET

:: REQUIREMENTS

  • Linux/ MacOsX / Windows
  • Java

:: DOWNLOAD

 iBRET

:: MORE INFORMATION

Schnitzcells – Quantitative Analysis of Fluorescent Time-lapse movies of Living Cells

Schnitzcells

:: DESCRIPTION

Schnitzcells is a MATLAB based software that allows for quantitative analysis of fluorescent time-lapse movies of living cells.  The software package is developed most specifically for bacteria and has been instrumental in analyzing  E.coli and B. subtilis movies.

::DEVELOPER

The Elowitz Lab

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Windows / Linux / Mac OsX
  • MabLab

:: DOWNLOAD

 Schnitzcells

:: MORE INFORMATION

Citation

Young, J. W. ,Locke, J.C.W.,Altinok,A.,Rosenfeld,N.,Bacarian,T.,Swain,P.S.,Mjolsness,E.,Alon,U.,Elowitz,M.B.
Measuring single-cell gene expression dynamics in bacteria using fluorescence time-lapse microscopy.
Nature Protocols 7, 80–88 (2012)