MAIRA 0.1.7 – Real-time Taxonomic and Functional analysis of long Reads on a laptop

MAIRA 0.1.7

:: DESCRIPTION

MAIRA is a new standalone program for interactive taxonomic and functional analysis of long read metagenomic sequencing data on a laptop without internet access. The program performs fast, online, genus-level analysis, and on-demand, detailed taxonomic and functional analysis. It uses two levels of frame-shift-aware alignment of DNA reads against protein reference sequences, and then performs detailed analysis using a protein synteny graph.

::DEVELOPER

the Algorithms in Bioinformatics lab

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux / MacOsX / Windows

:: DOWNLOAD

MAIRA

:: MORE INFORMATION

Citation

Albrecht B, Bağcı C, Huson DH.
MAIRA- real-time taxonomic and functional analysis of long reads on a laptop.
BMC Bioinformatics. 2020 Sep 17;21(Suppl 13):390. doi: 10.1186/s12859-020-03684-2. PMID: 32938391; PMCID: PMC7495841.