Tag: Kinemage

Flipkin 2.4 – Script to Make the Kinemages

Flipkin 2.4

:: DESCRIPTION

Flipkin works with Reduce, Probe and Prekin to help you decide the best “flip state” for asparagine, glutamine, and histidine. Flipkin will generate recommendations as to correct orientation, ‘flip’, of the sidechains of Asn, Gln and His. It will also generate kinemages of the flips and with all-atom contact dots for your selection of the best flip state. The newer version of this script uses perl; an older version using awk rather than perl is also available at right

::DEVELOPER

Richardson Lab

:: SCREENSHOTS

Command Line

:: REQUIREMENTS

:: DOWNLOAD

Flipkin

:: MORE INFORMATION

Flipkin is free software available under the terms of its own BSD-style license.

Mage 6.47 – Kinemage File 3D Display

Mage 6.47

:: DESCRIPTION

Mage is a 3D vector display program which shows “kinemage” graphics. Used in both teaching and research, in applications ranging from estuary ecology to X-ray crystallography model quality assessments, Mage displays the 3D relationships between data in an interactive environment which facilitates both open-ended exploration and structured presentation. It includes many tools for on-screen measurement, construction, and editing of the display objects; it can write either kinemage output or various types of 2D image output.

::DEVELOPER

Richardson Lab

:: SCREENSHOTS

:: REQUIREMENTS

  • Windows / Mac /  Linux / Silicon Graphics

:: DOWNLOAD

  Mage

:: MORE INFORMATION

Mage is free software available under the terms of its own BSD-style license.