ISOP 0.99.1 – Isoform-level expression patterns in single-cell RNA-sequencing data

ISOP 0.99.1

:: DESCRIPTION

ISOP (ISOform Patterns) is a mixture model o characterize the expression patterns of pairs of isoform from the same genes and determine if isoform-level expression patterns are random or signify biological effects.

::DEVELOPER

PROF. YUDI PAWITAN

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux
  • R

:: DOWNLOAD

ISOP

:: MORE INFORMATION

Citation

Vu TN, Wills QF, Kalari KR, Niu N, Wang L, Pawitan Y, Rantalainen M.
Isoform-level gene expression patterns in single-cell RNA-sequencing data.
Bioinformatics. 2018 Jul 15;34(14):2392-2400. doi: 10.1093/bioinformatics/bty100. PMID: 29490015; PMCID: PMC6041805.