Patristic – Input different Tree files and computes their Patristic Distances

Patristic

:: DESCRIPTION

Patristic is a Java program that uses as input different tree files and computes their patristic distances. Patristic allows saving and editing in different ways those distances.

::DEVELOPER

Mathieu Fourment

 SCREENSHOTS

Patristic

:: REQUIREMENTS

  • Linux / Windows / MacOsX
  • Java

:: DOWNLOAD

  Patristic

:: MORE INFORMATION

Citation

Fourment M, Gibbs MJ.
PATRISTIC: a program for calculating patristic distances and graphically comparing the components of genetic change.
BMC Evol BIOl. 2006; 6:1

genio 1.0.12 – Genetics Input/Output Functions

genio 1.0.12

:: DESCRIPTION

The genio (GENetics I/O) package provides easy-to-use and efficient readers and writers for formats in genetics research.

::DEVELOPER

The Ochoa Lab 

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux/ MacOsX / Windows
  • R

:: DOWNLOAD

genio

:: MORE INFORMATION

SliderPrep – Prepares Aligned DNA Sequences for Input into DNA Slider

SliderPrep

:: DESCRIPTION

SliderPrep will take aligned DNA sequences and create the input file for DNA Slider. It creates a list of polymorphisms and fixed differences, classified as synonymous, non-coding, or amino acid replacement variation.

::DEVELOPER

John H. McDonald

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Windows/MacOsX

:: DOWNLOAD

 SliderPrep

:: MORE INFORMATION

Author tool 4.0 – Input data into Reactome

Author tool 4.0

:: DESCRIPTION

The Author tool is designed for biologists to input data into Reactome (an open-source, open access, manually curated and peer-reviewed pathway database.)

::DEVELOPER

Reactome Team

:: SCREENSHOTS

:: REQUIREMENTS

  • Windows / Linux/  MacOSX
  • Java

:: DOWNLOAD

 Author tool

:: MORE INFORMATION

Citation