Redeem 1.1 – Detect Sequencing Errors in Illumina reads

Redeem 1.1

:: DESCRIPTION

Redeem (Read error detection in repetitive genomes)detects sequencing errors in Illumina reads (might be applicable for other types of next-gen sequencing equipments).

::DEVELOPER

Prof. Srinivas Aluru Research group

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux
  • C++ compiler

:: DOWNLOAD

 Redeem

:: MORE INFORMATION

Citation

X. Yang, S. Aluru and K. Dorman,
Repeat-aware Modeling and Correction of Short Read Errors”,
BMC Bioinformatics, 2011 to appear.

Barcoded Data Preparation Tools – Preparation of Raw Illumina Reads for Further Analysis

Barcoded Data Preparation Tools

:: DESCRIPTION

Barcoded Data Preparation Tools is a scripts included are for use in preparation of raw illumina reads for further analysis.

::DEVELOPER

The Comai Lab

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux
  • Python

:: DOWNLOAD

 Barcoded Data Preparation Tools

:: MORE INFORMATION