Tag: IGB

IGB 9.1.6 – Visualization for Genome-scale Data

IGB 9.1.6

:: DESCRIPTION

IGB (Integrated Genome Browser) is an interactive, zoomable, scrollable software program you can use to visualize and explore genome-scale data sets, such as tiling array data, next-generation sequencing results, genome annotations, microarray designs, and the sequence itself.

::DEVELOPER

IGB team Department of Bioinformatics and Genomics, University of North Carolina at Charlotte

:: SCREENSHOTS

:: REQUIREMENTS

  • Linux / Windows / Mac OsX
  • Java

:: DOWNLOAD

IGB

:: MORE INFORMATION

Citation:

Nicol JW, Helt GA, Blanchard SG Jr, Raja A, Loraine AE.
The Integrated Genome Browser: free software for distribution and exploration of genome-scale datasets.
Bioinformatics. 2009 Oct 15;25(20):2730-1.

IGB 0.01 – Computing Individualized Genetic Barrier

IGB 0.01

:: DESCRIPTION

IGB is an R script for computing individualized genetic barrier.

::DEVELOPER

the Computational Biology Group (CBG)

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Windows / Linux / MacOsX
  • R package

:: DOWNLOAD

 IGB

:: MORE INFORMATION

Citation

PLoS Comput Biol. 2013 Aug;9(8):e1003203. doi: 10.1371/journal.pcbi.1003203. Epub 2013 Aug 29.
The Individualized Genetic Barrier Predicts Treatment Response in a Large Cohort of HIV-1 Infected Patients.
Beerenwinkel N, Montazeri H, Schuhmacher H, Knupfer P, von Wyl V, Furrer H, Battegay M, Hirschel B, Cavassini M, Vernazza P, Bernasconi E, Yerly S, B?ni J, Klimkait T, Cellerai C, Günthard HF; Swiss HIV Cohort Study.