PredHS 1.0.5 – Prediction of Hot Spots by Using Structural Neighborhood Properties

PredHS 1.0.5

:: DESCRIPTION

PredHS is a computational method that can effectively identify hot spots on protein-protein interaction interfaces by using optimally structural neighborhood properties.

::DEVELOPER

DLab (Data Mining and Bioinformatics Lab)

:: SCREENSHOTS

N/A

:: REQUIREMENTS

Web Browser

:: DOWNLOAD

:: MORE INFORMATION

Citation

PredHS: a web server for predicting protein-protein interaction hot spots by using structural neighborhood properties.
Deng L, Zhang QC, Chen Z, Meng Y, Guan J, Zhou S.
Nucleic Acids Res. 2014 May 22. pii: gku437.

HotSPRing – Hot Spot at Protein-RNA interacing surface

HotSPRing

:: DESCRIPTION

HotSPRing is a web server to predict the host spots in RNA binding proteins (RBPs)

::DEVELOPER

Computational Structural Biology Lab , Indian Institute of Technology Kharagpur

:: SCREENSHOTS

N/A

:: REQUIREMENTS

Web browser

:: DOWNLOAD

:: MORE INFORMATION

Citation

Probing binding hot spots at protein-RNA recognition sites.
Barik A, Nithin C, Karampudi NB, Mukherjee S, Bahadur RP.
Nucleic Acids Res. 2016 Jan 29;44(2):e9. doi: 10.1093/nar/gkv876.

HotPoint – Hot Spot Prediction Server for Protein Interfaces

HotPoint

:: DESCRIPTION

HotPoint is a web server which predicts hot spots in protein interfaces using an empirical model.

::DEVELOPER

the COSBI (Computational Systems Biology) group

:: SCREENSHOTS

N/A

:: REQUIREMENTS

Web browser

:: DOWNLOAD

:: MORE INFORMATION

Citation

HotPoint: hot spot prediction server for protein interfaces.
Tuncbag N, Keskin O, Gursoy A.
Nucleic Acids Res. 2010 Jul;38(Web Server issue):W402-6. doi: 10.1093/nar/gkq323.

HotSpot – Hot Spot Residues Prediction

HotSpot

:: DESCRIPTION

Hot Spot is a software of prediction of hot spot residues through physicochemical characteristics of amino acid sequences

::DEVELOPER

Structural and Functional Bioinformatics Group, King Abdullah University of Science and Technology

:: SCREENSHOTS

N/A

:: REQUIREMENTS

Linux / Windows / MacOsX
Java

:: DOWNLOAD

HotSpot

:: MORE INFORMATION

Citation

Proteins. 2013 Aug;81(8):1351-62. doi: 10.1002/prot.24278.
Accurate prediction of hot spot residues through physicochemical characteristics of amino acid sequences.
Chen P1, Li J, Wong L, Kuwahara H, Huang JZ, Gao X.