cellHTS2 2.57.0 – Analysis of Cell-based RNAi Screens

cellHTS2 2.57.0

:: DESCRIPTION

cellHTS2 is a software package implemented in Bioconductor/R to analyze cell-based high-throughput RNAi screens.

::DEVELOPER

Boutros group & Huber Group

:: SCREENSHOTS

N/A

:: REQUIREMENTS

Linux/ WIndows/MacOsX
R package
BioConductor
Java

:: DOWNLOAD

:: MORE INFORMATION

Citation

Genome Biol. 2006;7(7):R66.
Analysis of cell-based RNAi screens.
Boutros M, Brás LP, Huber W.

Pelz., O., Gilsdorf, M., Boutros, M. (2010).
web cellHTS2: A web application for the analysis of high-throughput screening data.
BMC Bioinformatics 11:185.

HTSanalyzeR 2.38.0 – Network analysis of High Throughput Screens

HTSanalyzeR 2.38.0

:: DESCRIPTION

HTSanalyzeR provides classes and methods for gene set over-representation, enrichment and network analyses on high-throughput screens.

::DEVELOPER

the Markowetz lab

:: SCREENSHOTS

N/A

:: REQUIREMENTS

Linux / MacOsX / Windows
R
BioCOnductor

:: DOWNLOAD

:: MORE INFORMATION

Citation

Bioinformatics. 2011 Mar 15;27(6):879-80. doi: 10.1093/bioinformatics/btr028. Epub 2011 Jan 22.
HTSanalyzeR: an R/Bioconductor package for integrated network analysis of high-throughput screens.
Wang X1, Terfve C, Rose JC, Markowetz F.