Tag: Heterogeneous

ellipsoidFN 0.0.1 – Identifying a Heterogeneous set of Cancer Biomarkers based on Gene Expressions

ellipsoidFN 0.0.1

:: DESCRIPTION

ellipsoidFN (ellipsoid Feature Net) is a software to model the disease complexity by ellipsoids and seek a set of heterogeneous biomarkers.

::DEVELOPER

APORC

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Windows/ Linux /MacOsX
  • matlab

:: DOWNLOAD

 ellipsoidFN

:: MORE INFORMATION

Citation

Xianwen Ren, Yong Wang, Luonan Chen, Xiang-Sun Zhang, and Qi Jin.
ellipsoidFN: a tool for identifying a heterogeneous set of cancer biomarkers based on gene expressions.
Nucleic Acids Research, 2013 41: e53.

Pooling – Next-Generation Sequencing of Heterogeneous Viral Populations using Combinatorial Pooling

Pooling

:: DESCRIPTION

Pooling is a computational framework for next-generation sequencing of heterogeneous viral populations using combinatorial pooling

::DEVELOPER

Georgia State University NGS Research Group

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Windows / Linux / MacOsX
  • Java

:: DOWNLOAD

 Pooling

:: MORE INFORMATION

Citation

Computational Framework for Next-Generation Sequencing of Heterogeneous Viral Populations using Combinatorial Pooling.
Skums P, Artyomenko A, Glebova O, Ramachandran S, Mandoiu I, Campo DS, Dimitrova Z, Zelikovsky A, Khudyakov Y.
Bioinformatics. 2014 Oct 29. pii: btu726.