HapSim 0.31 – Haplotype Data Simulation

HapSim 0.31

:: DESCRIPTION

HapSim is a package for haplotype data simulation. Haplotypes are generated such that their allele frequencies and linkage disequilibrium coefficients match those estimated from an input data set.

::DEVELOPER

Giovanni Montana

:: SCREENSHOTS

N/A

:: REQUIREMENTS

Linux / Windows / MacOsX
R package

:: DOWNLOAD

HapSim

:: MORE INFORMATION

Citation

Bioinformatics. 2005 Dec 1;21(23):4309-11. Epub 2005 Sep 27.
HapSim: a simulation tool for generating haplotype data with pre-specified allele frequencies and LD coefficients.
Montana G.

HAPSIM – Produce the Case-control Multilocus Genotype Data

HAPSIM

:: DESCRIPTION

HAPSIM is a program for generating case-control multi-locus genotype data under a specified disease model.

::DEVELOPER

Bernard North

:: SCREENSHOTS

Command Line

:: REQUIREMENTS

Windows

:: DOWNLOAD

HAPSIM

:: MORE INFORMATION

Citation:

B.V. North, D. Curtis, P.G.Cassell, G.A.Hitman and P. C. Sham
Assessing optimal neural network architecture for identifying disease-associated multi-marker genotypes using a permutation test, and application to calpain 10 polymorphisms associated with diabetes.
Annals of Human Genetics 67: 348-356