Haploscope – Visualize Haplotype Diversity

Haploscope

:: DESCRIPTION

Haploscope is a software package that facilitates flexible rendering of images to aid interpretation of model-based summaries of population haplotypes. Haploscope is designed to accept haplotype frequency input directly from output files of fastPHASE (Scheet & Stephens, 2006), though output from other cluster-based models for population haplotypes could be adapted for input to Haploscope.

::DEVELOPER

paul scheet lab

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux/Windows/MacOsX
  • Java

:: DOWNLOAD

 Haploscope

:: MORE INFORMATION

Citation

San Lucas, F. A., Rosenberg, N. A. and Scheet, P. (2012),
Haploscope: a tool for the graphical display of haplotype structure in populations.
Genetic Epidemiology, 36: 17-21. doi: 10.1002/gepi.20640.