GPSmatch

:: DESCRIPTION

GPSmatch is an R package for calculating the Jaccard index to compare ChIP-Seq peaks from one experiment to the peaks of other ChIP-Seq experiments stored in a user-supplied customizable database.

::DEVELOPER

Bao Lab

:: SCREENSHOTS

N/A

:: REQUIREMENTS

• Windows/ Linux / MacOsX
• R
• BedTools

:: DOWNLOAD

GPSmatch

:: MORE INFORMATION

Citation

Dong A, Bao X.
GPSmatch: An R Package for Comparing Genomic-binding Profile Similarity among Transcriptional Regulators using Customizable Databases.
Bioinformatics. 2021 Oct 21:btab728. doi: 10.1093/bioinformatics/btab728. Epub ahead of print. PMID: 34672337.