GenoMS 20120110 – Sequencing Whole Proteins using a Template Databases

GenoMS 20120110

:: DESCRIPTION

GenoMS is a tool for sequencing a small set of proteins using an imperfect database and tandem mass spectra. The database need not contain full protein sequence, but instead can contain exons or partial sequences. The database can also be a small region of the genome. Tandem mass spectra should be from overlapping peptides produced from digestion by multiple proteases.

::DEVELOPER

Natalie Castellana  ,CCMS The Center for Computational Mass Spectrometry

:: SCREENSHOTS

N/A

:: REQUIREMENTS

:: DOWNLOAD

   GenoMS

:: MORE INFORMATION

Citation:

Template Proteogenomics: sequencing whole proteins using an imperfect database.
NE Castellana, V Pham, D Arnott, JR Lill, V Bafna. (2010).
Mol. Cell. Proteomics, 9, 6:1260-70.