IGD – A high-performance Search Engine for large-scale Genomic Interval Datasets

IGD

:: DESCRIPTION

IGD (integrated genome database) is a method and tool for searching genome interval datasets more than three orders of magnitude faster than existing approaches, while using only one hundredth of the memory.

::DEVELOPER

Sheffield lab of computational biology

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux
  • Python

:: DOWNLOAD

IGD

:: MORE INFORMATION

Citation

Feng J, Sheffield NC.
IGD: high-performance search for large-scale genomic interval datasets.
Bioinformatics. 2020 Dec 26:btaa1062. doi: 10.1093/bioinformatics/btaa1062. Epub ahead of print. PMID: 33367484.