SR4GN 1.0 – Species Recognition software tool for Gene Normalization

SR4GN 1.0

:: DESCRIPTION

SR4GN is a species recognition software tool for gene normalization.

::DEVELOPER

Zhiyong Lu

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux/ WIndows
  • Perl

:: DOWNLOAD

 SR4GN

:: MORE INFORMATION

Citation

PLoS One. 2012;7(6):e38460. doi: 10.1371/journal.pone.0038460. Epub 2012 Jun 5.
SR4GN: a species recognition software tool for gene normalization.
Wei CH, Kao HY, Lu Z.

pGenN – Gene Normalization Tool for Plant Genes and Proteins in Scientific Literature

pGenN

:: DESCRIPTION

pGenN is a system specifically designed for plant gene normalization. This pGenN website enables user search gene normalization information by keywords, a list of PMIDs, or UniProt ACs in the database. The results (Gene names and corresponding UniProt ACs) are displayed in sortable tables with text evidence and downloadable for further research.

::DEVELOPER

BioNLP and Text Mining Lab

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Web browser

:: DOWNLOAD

 NO

:: MORE INFORMATION

Citation

pGenN, a Gene Normalization Tool for Plant Genes and Proteins in Scientific Literature.
Ding R, Arighi CN, Lee JY, Wu CH, Vijay-Shanker K.
PLoS One. 2015 Aug 10;10(8):e0135305. doi: 10.1371/journal.pone.0135305.

GeneTUKit 1.1 – Document-level Gene Normalization

GeneTUKit 1.1

:: DESCRIPTION

GeneTUKit is a document-level gene normalization software for full-text articles.

::DEVELOPER

GeneTUKit team

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux
  • Java

:: DOWNLOAD

 GeneTUKit

:: MORE INFORMATION

Citation

Bioinformatics. 2011 Apr 1;27(7):1032-3. doi: 10.1093/bioinformatics/btr042. Epub 2011 Feb 8.
GeneTUKit: a software for document-level gene normalization.
Huang M1, Liu J, Zhu X.