KMgene 1.3 – Gene-based Association analysis for complex Traits

KMgene 1.3

:: DESCRIPTION

KMgene is an unified R package for gene-based association analysis for complex traits

::DEVELOPER

Qi Yan

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux
  • R
:: DOWNLOAD

KMgene

:: MORE INFORMATION

Citation

Yan Q, Fang Z, Chen W.
KMgene: a unified R package for gene-based association analysis for complex traits.
Bioinformatics. 2018 Jun 15;34(12):2144-2146. doi: 10.1093/bioinformatics/bty066. PMID: 29438558; PMCID: PMC6246171.

PrediXcan – Gene-based Association method for Mapping Traits

PrediXcan

:: DESCRIPTION

PrediXcan is a gene-based association test that prioritizes genes that are likely to be causal for the phenotype.

::DEVELOPER

Gamazon Lab

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux / MacOsX
  • R / Python

:: DOWNLOAD

PrediXcan

 :: MORE INFORMATION

Citation

Gamazon ER, Wheeler HE, Shah KP, Mozaffari SV, Aquino-Michaels K, Carroll RJ, Eyler AE, Denny JC; GTEx Consortium, Nicolae DL, Cox NJ, Im HK.
A gene-based association method for mapping traits using reference transcriptome data.
Nat Genet. 2015 Sep;47(9):1091-8. doi: 10.1038/ng.3367. Epub 2015 Aug 10. PMID: 26258848; PMCID: PMC4552594.