:: DESCRIPTION
FAST is an application for genome-wide studies by efficiently running several gene based analysis methods simultaneously on the same data set.
::DEVELOPER
:: SCREENSHOTS
N/A
::REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
Citation
Fast association tests for genes with FAST.
Chanda P, Huang H, Arking DE, Bader JS.
PLoS One. 2013 Jul 23;8(7):e68585. doi: 10.1371/journal.pone.0068585.
:: DESCRIPTION
BLAST2GENE is a program that allows a detailed analysis of genomic regions containing completely or partially duplicated genes. From a BLAST (or BL2SEQ) comparison of a protein or nucleotide query sequence with any genomic region of interest, BLAST2GENE processes all high scoring pairwise alignments (HSPs) and provides the disposition of all independent copies along the genomic fragment. The results are provided in text and PostScript formats to allow an automatic and visual evaluation of the respective region.
::DEVELOPER
:: SCREENSHOTS
N/A
:: REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
Citation
BLAST2GENE: a comprehensive conversion of BLAST output into independent genes and gene fragments.
Suyama M, Torrents D, Bork P
Bioinformatics. 2004 Aug 12; 20(12): 1968-70. Epub 2004 Mar 22; PubMed: 15037510.
