GCUA 1.2 – Evaluate Codon Usage in a set of Genes

GCUA 1.2

:: DESCRIPTION

GCUA (General Codon Usage Analysis) is designed to perform various tasks that are of use for evaluating codon usage in a set of genes.  You can get it to do some simple things like calculate the number of observations of a particular codon in a gene.  Or you can do the same thing for the combined dataset.  You can also look at amino acid usage frequencies (again for each gene or for the dataset as a whole).  The program also produces a distance matrix based on the similarity of codon usage in genes.

::DEVELOPER

McInerney lab

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Windows / Linux / MacOS

:: DOWNLOAD

GCUA

:: MORE INFORMATION

Citation:

McInerney, J.O. (1998).
GCUA (General Codon Usage Analysis).
Bioinformatics: 14 (4) 372-373.