FiltRest3D – Filtering Protein Models by Fuzzy Restraints

FiltRest3D

:: DESCRIPTION

FiltRest3D is a software for scoring and ranking of models according to their agreement with user-defined restraints.Automatic methods for protein structure prediction (fold-recognition, de novo folding, and docking programs) produce large sets of alternative models. These large model sets often include many native-like structures, which are scored as high as false positives. Such native-like models can be more easily identified based on data from experimental analyses used as structural restraints (e.g. identification of nearby residues by crosslinking, chemical modification, site-directed mutagenesis, deuterium exchange coupled with mass spectrometry etc.)

FiltRest3D Web Server

::DEVELOPER

Bujnicki Laboratory

:: SCREENSHOTS

N/A

:: REQUIREMENTS

:: DOWNLOAD

FiltRest3D

:: MORE INFORMATION

Citation

Michal J. Gajda,Irina Tuszynska1, Marta Kaczor, Anastasia Yu. Bakulina and Janusz M. Bujnicki
FILTREST3D: discrimination of structural models using restraints from experimental data
Bioinformatics (2010) 26 (23): 2986-2987