Babelomics 5 – Gene Expression and Functional Profiling Analysis Suite

Babelomics 5

:: DESCRIPTION

Babelomics is a complete suite of web tools for the functional profiling of genome scale experiments, with new and improved methods as well as more types of functional definitions. Babelomics includes different flavours of conventional functional enrichment methods as well as more advanced gene set analysis methods that makes it a unique tool among the similar resources available.

::DEVELOPER

Bioinformatics and Genomics Department at CIPF

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Web Browser

:: DOWNLOAD

  No, Only Web Service

:: MORE INFORMATION

Citation

Babelomics 5.0: functional interpretation for new generations of genomic data.
Alonso R, Salavert F, Garcia-Garcia F, Carbonell-Caballero J, Bleda M, Garcia-Alonso L, Sanchis-Juan A, Perez-Gil D, Marin-Garcia P, Sanchez R, Cubuk C, Hidalgo MR, Amadoz A, Hernansaiz-Ballesteros RD, Alemán A, Tarraga J, Montaner D, Medina I, Dopazo J.
Nucleic Acids Res. 2015 Apr 20. pii: gkv384

Medina I, Carbonell J, Pulido L, Madeira SC, Goetz S, Conesa A, Tárraga J, Pascual-Montano A, Nogales-Cadenas R, Santoyo J, García F, Marbà M, Montaner D, Dopazo J.
Babelomics: an integrative platform for the analysis of transcriptomics, proteomics and genomic data with advanced functional profiling.
Nucleic Acids Res. 2010 Jul;38(Web Server issue):W210-3. Epub 2010 May 16.

CoMet-Universe – Fast Comparative Functional Profiling of Metagenomes

CoMet-Universe

:: DESCRIPTION

CoMet-Universe is a web-server for comparative analysis of metagenomes based on protein domain signatures

::DEVELOPER

Department of Bioinformatics ,  University of Göttingen

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Web Browser

:: DOWNLOAD

 NO

 :: MORE INFORMATION

Citation

Aßhauer KP, Klingenberg H, Lingner T, Meinicke P.
Exploring neighborhoods in the metagenome universe.
Int J Mol Sci. 2014 Jul 14;15(7):12364-78. doi: 10.3390/ijms150712364. PMID: 25026170; PMCID: PMC4139848.

Lingner T, Asshauer KP, Schreiber F, Meinicke P.
CoMet—a web server for comparative functional profiling of metagenomes.
Nucleic Acids Res. 2011