:: DESCRIPTION
Tax4Fun is a open-source R package that predicts the functional capabilities of microbial communities based on 16S datasets.
::DEVELOPER
Department of Bioinformatics , University of Göttingen
:: SCREENSHOTS
N/A
:: REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
Citation
Tax4Fun: predicting functional profiles from metagenomic 16S rRNA data.
Aßhauer KP, Wemheuer B, Daniel R, Meinicke P.
Bioinformatics. 2015 May 7. pii: btv287.
:: DESCRIPTION
The software called PanFP (Pangenome-based functional profile) is a tool to predict functional composition of microbial communities based on communities survey data which builds a pangenome for each OTU and assigns the pangenome’s functional profile to the OTU.
::DEVELOPER
:: SCREENSHOTS
N/A
:: REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
Citation
PanFP: pangenome-based functional profiles for microbial communities.
Jun SR, Robeson MS, Hauser LJ, Schadt CW, Gorin AA.
BMC Res Notes. 2015 Sep 26;8(1):479.
:: DESCRIPTION
clusterProfiler implements methods to analyze and visualize functional profiles (GO and KEGG) of gene and gene clusters.
::DEVELOPER
Guangchuang YU,, Li-Gen Wang
:: SCREENSHOTS
N/A
:: REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
Citation
OMICS. 2012 May;16(5):284-7. doi: 10.1089/omi.2011.0118. Epub 2012 Mar 28.
clusterProfiler: an R package for comparing biological themes among gene clusters.
Yu G1, Wang LG, Han Y, He QY.
