GAP 0.0.1 – Gene functional Association Predictor

GAP 0.0.1

:: DESCRIPTION

GAP is an integrative, general-purpose framework for deriving a quantitative measure of gene similarity, which is relevant to a wide range of bioinformatics applications from gene clustering and phenotype and protein interactions predictions to interaction network modeling, and pharmacology analysis.

::DEVELOPER

Jurisica Lab

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Web browser

:: DOWNLOAD

 NO

:: MORE INFORMATION

Citation

BMC Syst Biol. 2013 Mar 14;7:22. doi: 10.1186/1752-0509-7-22.
Novel semantic similarity measure improves an integrative approach to predicting gene functional associations.
Vafaee F, Rosu D, Broackes-Carter F, Jurisica I.

PTMcode 2 – Known and predicted PTM Functional Associations

PTMcode 2

:: DESCRIPTION

PTMcode is a web resource for known and predicted functional associations between protein post-translational modifications (PTMs) within and between proteins.

::DEVELOPER

Bork Group

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Web browser

:: DOWNLOAD

 NO

:: MORE INFORMATION

Citation

PTMcode v2: a resource for functional associations of post-translational modifications within and between proteins.
Minguez P, Letunic I, Parca L, Garcia-Alonso L, Dopazo J, Huerta-Cepas J, Bork P.
Nucleic Acids Res. 2015 Jan;43(Database issue):D494-502. doi: 10.1093/nar/gku1081