FINDSITE 1.0 – Ligand-binding Site Prediction & Functional Annotation

FINDSITE 1.0

:: DESCRIPTION

FINDSITE is a threading-based binding site prediction/protein functional inference/ligand screening algorithm that detects common ligand binding sites in a set of evolutionarily related proteins. Crystal structures as well as protein models can be used as the target structures.

::DEVELOPER

Center for the Study of Systems Biology

:: REQUIREMENTS

  • Linux

:: DOWNLOAD

FINDSITE

:: MORE INFORMATION

Citation

Skolnick J and Brylinski M (2009)
FINDSITE: a combined evolution/structure-based approach to protein function prediction.
Brief Bioinform 10:378-91