bam2fastq 1.1.0 – Extract Sequences from a BAM file in Fastq format

bam2fastq 1.1.0

:: DESCRIPTION

bam2fastq is a program to extract sequences and qualities from a BAM file.

::DEVELOPER

The Genomic Services Lab

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux
  • C++ Compiler
:: DOWNLOAD

 bam2fastq

:: MORE INFORMATION

FastaFormat / FastQFormat / UnFastaFormat / UnFastQFormat – Conversion between Tab-delimited files and FASTA/ FastQ Format

FastaFormat / FastQFormat / UnFastaFormat / UnFastQFormat

:: DESCRIPTION

FastaFormat: Convert tab-delimited files into fasta format. Includes a quality score safe option (-q) for converting quality score files.

FastQFormat: Convert tab-delimited sequence and quality score files into fastQ format.

UnFastaFormat: Convert fasta files into tab-delimited format. Includes a quality score safe option (-q) for converting quality score files.

UnFastQFormat: Convert fastq files into tab-delimited format. Outputs sequences and quality scores into separate files. Edits sequence titles. Support for NCBI and Illumina formats.

::DEVELOPER

J. Cris Vera

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Windows / Mac OsX /  Linux
  • Perl

:: DOWNLOAD

 FastaFormat / FastQFormat / UnFastaFormat / UnFastQFormat

:: MORE INFORMATION