Tag: Exploratory Analysis

GENECLUST 1.0.2 – Exploratory Analysis of Gene Expression Microarray data

GENECLUST 1.0.2

:: DESCRIPTION

GeneClust is a piece of computer software which can be used as a tool for exploratory analysis of gene expression microarray data. The development of GeneClust was motivated by surging interest to search for interpretable biological structure in gene expression microarray data.

::DEVELOPER

Kim-Anh Do, Ph.D.

:: SCREENSHOTS

:: REQUIREMENTS

:: DOWNLOAD

 GENECLUST

:: MORE INFORMATION

Citation

Cancer Inform. 2007;5:25-43. Epub 2007 Apr 2.
Application of gene shaving and mixture models to cluster microarray gene expression data.
Do KA, McLachlan GJ, Bean R, Wen S.

adegenet 2.1.4 – Exploratory Analysis of Genetic data

adegenet 2.1.4

:: DESCRIPTION

adegenet is an  R package dedicated to the exploratory analysis of genetic data. It implements a set of tools ranging from multivariate methods to spatial genetics and genome-wise SNP data analysis.

::DEVELOPER

Thibaut Jombart

:: SCREENSHOTS

N/A

:: REQUIREMENTS

:: DOWNLOAD

  adegenet 

:: MORE INFORMATION

Citation

Jombart (2008),
“adegenet: a R package for the multivariate analysis of genetic markers“,
Bioinformatics, 24:1403-1405.