GENOMEPOP 2.7.7.1 – Evolve Populations of Genomes under complex Evolution Models and Demography

GENOMEPOP 2.7.7.1

:: DESCRIPTION

Genomepop is flexible software that allows the forward simulation of DNA sequences in a metapopulation context under a variety of conditions. Users can input their own sequences or tell the program to generate them. Retro and recurrent mutation can be allowed or neglected. A number of populations with any migration model can be defined. Each population consists of a number N of sequences or genomes.

::DEVELOPER

Antonio Carvajal-Rodriguez 

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux / Windows / MacOsX

:: DOWNLOAD

 GENOMEPOP

:: MORE INFORMATION

Citation

Antonio Carvajal-Rodriguez (2008)
GENOMEPOP: A program to simulate genomes in populations
BMC Bioinformatics 9: 223

SimRA – Simulates Generic Multiple Population Evolution Model with Admixture

SimRA

:: DESCRIPTION

SimRA (Simulation based on Random-graphs Algorithms) is a framework for simulating generic and complex evolutionary scenarios of multiple populations with subdivision and admixture.

::DEVELOPER

IBM Computational Genomics

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux / WIndows
  • JRE

:: DOWNLOAD

 SimRA

:: MORE INFORMATION

Citation

Sampling ARG of multiple populations under complex configurations of subdivision and admixture.
Carrieri AP, Utro F, Parida L.
Bioinformatics. 2015 Dec 7. pii: btv716.

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