Epiviz 3.0 / Epivizr 2.22.0 – Visualization Tool for Functional Genomics data

Epiviz 3.0 / Epivizr 2.22.0

:: DESCRIPTION

Epiviz is an interactive visualization tool for functional genomics data. It supports genome navigation like other genome browsers, but allows multiple visualizations of data within genomic regions using scatterplots, heatmaps and other user-supplied visualizations. It also includes data from the Gene Expression Barcode project for transcriptome visualization. It has a flexible plugin framework so users can add d3 visualizations

The Epivizr Bioconductor package provides Websocket communication to the epiviz web app or interactive visualization of genomic data.

::DEVELOPER

HCBravo Lab

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux/ Windows/ MacOsX
  • R
  • BioConductor

:: DOWNLOAD

 Epiviz , Epivizr

:: MORE INFORMATION

Citation

Nat Methods. 2014 Aug 3. doi: 10.1038/nmeth.3038.
Epiviz: interactive visual analytics for functional genomics data.
Chelaru F, Smith L, Goldstein N, Bravo HC