EPIP – Condition-specific Enhancer–promoter Interaction prediction

EPIP

:: DESCRIPTION

EPIP is a software used to identify target genes of enhancers in human genome. It is a novel computational method to reliably predict EPIs, especially condition-specific ones. EPIP is capable of predicting interactions in samples with limited data as well as in samples with abundant data.

::DEVELOPER

Hu Lab – Data Integration and Knowledge Discovery @ UCF

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux / Windows
  • Python

:: DOWNLOAD

EPIP

:: MORE INFORMATION

Citation:

Bioinformatics. 2019 Oct 15;35(20):3877-3883. doi: 10.1093/bioinformatics/btz641.
EPIP: a novel approach for condition-specific enhancer-promoter interaction prediction.
Talukder A, Saadat S, Li X, Hu H.