:: DESCRIPTION
Entropy is a PERL program that uses an EM algorithm for haplotype frequency estimation. It reads standard linkage format files.
::DEVELOPER
Institute for Clinical Molecular Biology
:: SCREENSHOTS
N/A
::REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
Citation
Hampe J, Schreiber S, Krawczak M (2003).
Entropy-based SNP selection for genetic association studies.
Hum Genet 114(1): 36-43
:: DESCRIPTION
DMEAS is a user-friendly DNA methylation analysis tool for DNA methylation pattern extraction, DNA methylation level estimation, DNA methylation entropy analysis and multi-sample comparison. It was developed in order to assess the DNA methylation variations for a given genomic locus or genome-wide methylation data.
::DEVELOPER
:: SCREENSHOTS
:: REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
Citation
DMEAS: DNA methylation entropy analysis software.
He J, Sun X, Shao X, Liang L, Xie H.
Bioinformatics. 2013 Aug 15;29(16):2044-5. doi: 10.1093/bioinformatics/btt332.
:: DESCRIPTION
MIDER is a general purpose software tool for inferring network structures. It has been developed with biological networks in mind, but can be applied in other areas.
::DEVELOPER
(Bio)Process Engineering group, IIM-CSIC
:: SCREENSHOTS
:: REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
Citation
MIDER: Network Inference with Mutual Information Distance and Entropy Reduction.
Villaverde AF, Ross J, Morán F, Banga JR.
PLoS One. 2014 May 7;9(5):e96732. doi: 10.1371/journal.pone.0096732. eCollection 2014.
:: DESCRIPTION
InfoTrim is a DNA read quality trimmer based on the Trimmomatic maximum information criterion model.
::DEVELOPER
:: SCREENSHOTS
N/A
:: REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
Citation
InfoTrim: A DNA read quality trimmer using entropy
2017 IEEE 7th International Conference on Computational Advances in Bio and Medical Sciences (ICCABS)
:: DESCRIPTION
EMVC filters the annotations for each gene set to minimize a measure of entropy across disjoint gene clusters computed for a range of cluster sizes over multiple bootstrap resampled datasets.
::DEVELOPER
H. Robert Frost <rob.frost at dartmouth.edu>
:: SCREENSHOTS
N/A
:: REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
Citation
Bioinformatics. 2014 Jun 15;30(12):1698-706. doi: 10.1093/bioinformatics/btu110. Epub 2014 Feb 25.
Optimization of gene set annotations via entropy minimization over variable clusters (EMVC).
Frost HR, Moore JH.
:: DESCRIPTION
RNAentropy implements two cubic time algorithms to compute the RNA thermodynamic structural entropy.
::DEVELOPER
:: SCREENSHOTS
N/A
:: REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
Citation
RNA Thermodynamic Structural Entropy.
Garcia-Martin JA, Clote P.
PLoS One. 2015 Nov 10;10(11):e0137859. doi: 10.1371/journal.pone.0137859.
