BarMap

:: DESCRIPTION

The program  bar_map  computes a mapping between a series of barrier trees as computed by the barriers program. This of interest in particular in the context of co-transcriptional folding, where the one can compute barrier trees corresponding to different length partial transcripts; or for dynamic landscapes produced e.g. when varying the temperature.

::DEVELOPER

Theoretical Biochemistry Group

:: SCREENSHOTS

N/A

:: REQUIREMENTS

• Linux

:: DOWNLOAD

 BarMap

:: MORE INFORMATION

Citation

BarMap: RNA folding on dynamic energy landscapes
Ivo L Hofacker, Christoph Flamm, Christian Heine, Michael T Wolfinger, Gerik Scheuermann, Peter F Stadler
RNA, 2010, 16, 7, 1308-1316