FAMD 1.31 – Dominant Fingerprint Data Handling and Analysis

FAMD 1.31

:: DESCRIPTION

FAMD (Fingerprint Analysis with Missing Data)  is an easy-to-use general-purpose program for dominant fingerprint data handling and analysis (explicitly allowing ambiguities/missing data points) with a graphical user interface, supporting flexible data input and export to a variety of formats. Analysis capabilities include distance-based analysis (trees and PCoA, with graphical 3D viewer), bootstrapping and consensus tree generation, allele frequency estimation, AMOVA, inter-population distances, Shannon’s index.

::DEVELOPER

Dr.  Philipp  Schlüter

:: SCREENSHOTS

:: REQUIREMENTS

  • Windows

:: DOWNLOAD

 FAMD

:: MORE INFORMATION

Citation:

Schlüter, P. M. & Harris, S. A., 2006,
Analysis of multilocus fingerprinting data sets containing missing data.
Mol. Ecol. Notes. 6: 569-572.

AFLPdat 20100624 – Handling of Dominant Genotypic data

AFLPdat 20100624

:: DESCRIPTION

AFLPdat is a collection of R functions which facilitates the handling of dominant genotypic data. It converts data from a standard tab separated table to the input formats of the following programs: Arlequin, Structure, Treecon, PAUP and Hickory.

::DEVELOPER

Ehrich, Dorothee

:: SCREENSHOTS

N/A

:: REQUIREMENTS

:: DOWNLOAD

 AFLPdat

:: MORE INFORMATION

Citation:

Ehrich D (2006)
AFLPdat: a collection of R functions for convenient handling of AFLP data.
Molecular Ecology Notes 6: 603-604.

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