Synthaser v1.1.21 – Analysing Domain Architecture of Fungal Secondary Metabolite Megasynth(et)ases

Synthaser v1.1.21

:: DESCRIPTION

Synthaser parses the results of a batch NCBI conserved domain search and determines the domain architecture of secondary metabolite synthases.

::DEVELOPER

Chooi Lab

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Windows / Linux / Mac OsX
  • Python

:: DOWNLOAD

Synthaser

:: MORE INFORMATION

Citation

Gilchrist CLM, Chooi YH.
Synthaser: a CD-Search enabled Python toolkit for analysing domain architecture of fungal secondary metabolite megasynth(et)ases.
Fungal Biol Biotechnol. 2021 Nov 11;8(1):13. doi: 10.1186/s40694-021-00120-9. PMID: 34763725.

PANDA – Protein Function Prediction Using Domain Architecture and Affinity Propagation on the GO Graph

PANDA

:: DESCRIPTION

PANDA (Propagation of Affinity and Domain Architecture) is a web server to predict protein functions in the format of Gene Ontology (GO) terms.

::DEVELOPER

Z. WANG LAB

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Web browser

:: DOWNLOAD

 NO

:: MORE INFORMATION

Citation

Wang Z, Zhao C, Wang Y, Sun Z, Wang N.
PANDA: Protein function prediction using domain architecture and affinity propagation.
Sci Rep. 2018 Feb 22;8(1):3484. doi: 10.1038/s41598-018-21849-1. PMID: 29472600; PMCID: PMC5823857.