:: DESCRIPTION
REQ is a command line program written in Java that estimates the rate of elementary quartets (REQ) for each internal branch of an unrooted binary phylogenetic tree from a distance matrix.
::DEVELOPER
Alexis Criscuolo (alexis.criscuolo@pasteur.fr)
:: SCREENSHOTS
N/A
:: REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
:: DESCRIPTION
Ancestor is a software which infer ancestral amino acid sequences from a set of homologous amino acid sequences whose phylogenetic relationships are known.
::DEVELOPER
:: SCREENSHOTS
N/A
:: REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
Citation:
Zhang J, Nei M (1997)
Accuracies of ancestral amino acid sequences inferred by the parsimony, likelihood, and distance methods.
J Mol Evol 44(Suppl 1):S139-S146
:: DESCRIPTION
Anc-gene is a software for inference of ancestral nucleotide sequences of protein coding genes from a set of present-day sequences whose phylogenetic relationships are known. It first infers the amino acids by the distance-based Bayesian method, and then infers the underlying nucleotide sequences by fixing the inferred amino acids.
::DEVELOPER
:: SCREENSHOTS
N/A
:: REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
Citation:
Zhang J, Rosenberg HF, Nei M (1998)
Positive Darwinian selection after gene duplication in primate ribonuclease genes.
Proc. Natl. Acad. Sci. USA 95:3708-3713.
