DISSECT 1.0.2 – Transcriptome-to-Genome Alignment Tool

DISSECT 1.0.2

:: DESCRIPTION

Dissect (DIScovery of Structural Alteration Event Containing Transcripts) is a transcriptome-to-genome alignment tool, which can identify and characterize transcriptomic events such as duplications, inversions, rearrangements and fusions. Dissect is suitable for whole transcriptome structural variation discovery problems involving sufficiently long reads or accurately assembled contigs.

::DEVELOPER

Lab for Bioinformatics and Computational Genomics

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux

:: DOWNLOAD

  DISSECT

:: MORE INFORMATION

Citation

Yorukoglu D, Hach F, Swanson L, Collins CC, Birol I, Sahinalp SC
Dissect: detection and characterization of novel structural alterations in transcribed sequences
Bioinformatics. 2012 Jun 15;28(12):i179-87

COMMA – Dissect Proteins Dynamical Architectures

COMMA

:: DESCRIPTION

COMMA (COMmunication MApping) is a method to dissect proteins dynamical architectures.

::DEVELOPER

Laboratory of Computational and Quantitative Biology(LCQB)

:: SCREENSHOTS

N/a

:: REQUIREMENTS

  • Windows
  • Python

:: DOWNLOAD

 COMMA

:: MORE INFORMATION

Citation

Y. Karami, E. Laine and A. Carbone,
Dissecting protein architecture with communication blocks and communicating segment pairs,
BMC Bioinformatics (2015).