pydca 1.0 – Direct Coupling analysis software for Protein and RNA sequences

pydca 1.0

:: DESCRIPTION

pydca is Python implementation of direct coupling analysis (DCA) of residue coevolution for protein and RNA sequence families using the mean-field and pseudolikelihood maximization algorithms.

::DEVELOPER

Multiscale Biomolecular Simulation

:: SCREENSHOTS

n/a

:: REQUIREMENTS

  • Linux
  • Python
  • C++

:: DOWNLOAD

pydca

:: MORE INFORMATION

Citation

Zerihun MB, Pucci F, Peter EK, Schug A.
pydca v1.0: a comprehensive software for direct coupling analysis of RNA and protein sequences.
Bioinformatics. 2020 Apr 1;36(7):2264-2265. doi: 10.1093/bioinformatics/btz892. PMID: 31778142.