Deduce – Deduction of Molecular Reaction Network Structure from Measured Time-series

Deduce

:: DESCRIPTION

Deduce is a now very old but still surprisingly effective correlation-based method of reconstructing molecular reaction networks from time-series data.

::DEVELOPER

The Arkin laboratory 

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux /Windows/ MacOsX
  • C Compiler

:: DOWNLOAD

 Deduce

:: MORE INFORMATION

FetalQuant – Fractional Fetal DNA Concentration Deduction

FetalQuant

:: DESCRIPTION

FetalQuant is a statistical mixture model which utilizes the maximum likelihood to estimate the fractional fetal DNA concentration directly from targeted MPS of DNA in maternal plasma.

::DEVELOPER

Dr. Sun Hao’s Bioinformatics Lab

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux

:: DOWNLOAD

 FetalQuant

:: MORE INFORMATION

Citation

Bioinformatics. 2012 Nov 15;28(22):2883-90. doi: 10.1093/bioinformatics/bts549. Epub 2012 Sep 8.
FetalQuant: deducing fractional fetal DNA concentration from massively parallel sequencing of DNA in maternal plasma.
Jiang P1, Chan KC, Liao GJ, Zheng YW, Leung TY, Chiu RW, Lo YM, Sun H.

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