Tag: CUT&RUNTools

CUT&RUNTools – A pipeline for analyzing CUT&RUN data

CUT&RUNTools

:: DESCRIPTION

CUTRUNTools contains the pipeline for conducting a CUT&RUN analysis. The pipeline comprises of read trimming, alignment steps, motif finding steps, and finally the motif footprinting step.

::DEVELOPER

Guo-CHeng Yuan Lab

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux/Windows/MacOsX
  • Python

:: DOWNLOAD

CUTRUNTools

:: MORE INFORMATION

Citation

Genome Biol, 20 (1), 192 2019 Sep 9
CUT&RUNTools: A Flexible Pipeline for CUT&RUN Processing and Footprint Analysis
Qian Zhu , Nan Liu , Stuart H Orkin , Guo-Cheng Yuan