CUDASW++ 3.1.2
:: DESCRIPTION
CUDASW++ (compute unified device architecture) is a bioinformatics software for Smith-Waterman protein database searches that takes advantage of the massively parallel CUDA architecture of NVIDIA Tesla GPUs to perform sequence searches 10x-50x faster than NCBI BLAST.
::DEVELOPER
:: SCREENSHOTS
N/A
:: REQUIREMENTS
- Linux
- CUDA toolkits and SDK 2.0 or higher.
:: DOWNLOAD
:: MORE INFORMATION
Citation:
Yongchao Liu, Bertil Schmidt, Douglas L. Maskell:
“CUDASW++2.0: enhanced Smith-Waterman protein database search on CUDA-enabled GPUs based on SIMT and virtualized SIMD abstractions“.
BMC Research Notes, 2010, 3:93