xiNET 1.1.13 – Crosslink Viewer

xiNET 1.1.13

:: DESCRIPTION

xiNET is an open source visualisation of cross-linking / mass spectrometry data. It provides an interactive 2D map of the cross-link network.

::DEVELOPER

Rappsilber Laboratory

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux
  • PHP
  • Java

:: DOWNLOAD

 xiNET

:: MORE INFORMATION

Citation

Mol Cell Proteomics. 2015 Feb 3. pii: mcp.O114.042259.
xiNET: cross-link network maps with residue resolution.
Combe CW, Fischer L, Rappsilber J

mCross – Modeling RBP Binding Specificity by registering protein-RNA Crosslink Sites

mCross

:: DESCRIPTION

mCrossBase is a database of RNA-binding protein (RBP) binding motifs and crosslink sites defined jointly from CLIP data using a novel algorithm mCross

::DEVELOPER

Zhang Lab

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Web browser

:: DOWNLOAD

NO

:: MORE INFORMATION

Citation

Feng et al. (2019),
Modeling the in vivo specificity of RNA-binding proteins by precisely registering protein-RNA crosslink sites.
Mol Cell. 74:1189-1204.E6.