CRISPR-SURF 1.0 – Screening of Uncharacterized Region Function

CRISPR-SURF 1.0

:: DESCRIPTION

CRISPR-SURF is an exploratory and interactive computational framework for the design and analysis of CRISPR-Cas, CRISPRi, and CRISPRa tiling screens.

::DEVELOPER

Pinello Lab.

:: SCREENSHOTS

N/a

:: REQUIREMENTS

  • Linux
  • Docker

:: DOWNLOAD

CRISPR-SURF

:: MORE INFORMATION

Citation

Hsu JY, Fulco CP, Cole MA, Canver MC, Pellin D, Sher F, Farouni R, Clement K, Guo JA, Biasco L, Orkin SH, Engreitz JM, Lander ES, Joung JK, Bauer DE, Pinello L.
CRISPR-SURF: discovering regulatory elements by deconvolution of CRISPR tiling screen data.
Nat Methods. 2018 Dec;15(12):992-993. doi: 10.1038/s41592-018-0225-6. PMID: 30504875; PMCID: PMC6620603.