CRISPRmap 2.1
:: DESCRIPTION
CRISPRmap provides a quick and detailed insight into repeat conservation and diversity of both bacterial and archaeal systems. It comprises the largest dataset of CRISPRs to date and enables comprehensive independent clustering analyses to determine conserved sequence families, potential structure motifs for endoribonucleases, and evolutionary relationships.
::DEVELOPER
Chair for Bioinformatics Freiburg
:: SCREENSHOTS
N/A
:: REQUIREMENTS
- Web Browser
:: DOWNLOAD
NO
:: MORE INFORMATION
Citation
CRISPRstrand: predicting repeat orientations to determine the crRNA-encoding strand at CRISPR loci.
Alkhnbashi OS, Costa F, Shah SA, Garrett RA, Saunders SJ, Backofen R.
Bioinformatics. 2014 Sep 1;30(17):i489-i496. doi: 10.1093/bioinformatics/btu459.
Nucleic Acids Res. 2013 Sep;41(17):8034-44. doi: 10.1093/nar/gkt606. Epub 2013 Jul 17.
CRISPRmap: an automated classification of repeat conservation in prokaryotic adaptive immune systems.
Lange SJ1, Alkhnbashi OS, Rose D, Will S, Backofen R.
