ChemoPy 1.0 – Python package for Computational Biology and Chemoinformatics

ChemoPy 1.0

:: DESCRIPTION

ChemoPy is an open-source python package called chemoinformatics in python for calculating the commonly used structural and physicochemical features.

::DEVELOPER

ChemoPy team

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux /  MacOsX / Window
  • Python

:: DOWNLOAD

 ChemoPy

:: MORE INFORMATION

Citation

Bioinformatics. 2013 Apr 15;29(8):1092-4. doi: 10.1093/bioinformatics/btt105. Epub 2013 Mar 14.
ChemoPy: freely available python package for computational biology and chemoinformatics.
Cao DS, Xu QS, Hu QN, Liang YZ.

QUT.Bio beta – Tools for Bioinformatics and Computational Biology

QUT.Bio beta

:: DESCRIPTION

QUT.Bio focuses on tools for bioinformatics and computational biology; new approaches to visualize sequences and the relationships between them—through SilverMap and SilverGene; and methods for promoter prediction, pattern description languages, and mash-ups.

:: DEVELOPER

QUT Institute of Health and Biomedical Innovation and the Queensland Facility for Advanced Bioinformatics

:: SCREENSHOTS

QUT.Bio

:: REQUIREMENTS

  • Windows

:: DOWNLOAD

 QUT.Bio

:: MORE INFORMATION

BioHPC 1Rev293 – Computational Biology Application Suite for High Performance Computing

BioHPC 1Rev293

:: DESCRIPTION

BioHPC is a suite of applications modified and adapted for efficient use in an HPC (High Performance Computing)environment with ASP.NET interface allowing both easy access and use, as well as easy administration of users, applications, data and other features.

::DEVELOPER

Computational Biology Service Unit

:: SCREENSHOTS

:: REQUIREMENTS

  • Windows
  • Microsoft .NET 3.5 Runtime
  • Microsoft SQL Express Advanced

:: DOWNLOAD

  BioHPC

:: MORE INFORMATION

ISBJava 2.4.4 – Java library for Research in Computational Biology

ISBJava 2.4.4

:: DESCRIPTION

The ISBJava project is a library (collection) of classes written in the Java programming language, that are intended to be used for research in computational biology.

::DEVELOPER

Stephen Ramsey in the laboratory of Hamid Bolouri at ISB

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Windows/ Linux / Mac OsX
  • JAVA

:: DOWNLOAD

ISBJava ; manual

:: MORE INFORMATION

The license agreement is the GNU Lesser General Public License (LGPL), which is a standard “free software” and “open source” license.

Please e-mail comments or corrections regarding this document to:  isbjava at systemsbiology.org